Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
|
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
|---|---|---|---|---|---|---|---|---|---|
| THCA | rs71055110 | chr12:1071302 | AG/A | 0.000118 | 473 | 16.23 | 15.15 | 9.32 | KM Plot |
| THCA | rs7105584 | chr11:3937888 | A/G | 0.000218 | 484 | 19.55 | 14.98 | 15.9 | KM Plot |
| THCA | rs71062576 | chr1:41566229 | T/TTTTC | 2.04E-12 | 480 | 17.7 | 17.73 | 14.93 | KM Plot |
| THCA | rs7106715 | chr11:133838905 | A/G | 0.00019 | 490 | 8.73 | 15.9 | 16.07 | KM Plot |
| THCA | rs7106806 | chr11:133838837 | G/C | 0.00019 | 489 | 16.13 | 15.9 | 8.73 | KM Plot |
| THCA | rs7109132 | chr11:93649521 | G/T | 0.000224 | 489 | 15.15 | 18.05 | 16.63 | KM Plot |
| THCA | rs7111339 | chr11:57090972 | G/C | 2.24E-11 | 486 | 16.33 | 14.47 | 20.77 | KM Plot |
| THCA | rs71115571 | chr14:23191514 | T/TA | 1.47E-6 | 487 | 15.23 | 17.13 | 21.67 | KM Plot |
| THCA | rs71149175 | chr16:20745431 | CAAATAA/C | 3.38E-5 | 490 | 16.38 | 14.47 | 17.65 | KM Plot |
| THCA | rs7115496 | chr11:4168046 | T/C | 1.74E-7 | 490 | 19.05 | 13.9 | 16.38 | KM Plot |
| THCA | rs7116457 | chr11:3898207 | A/C | 7.15E-6 | 468 | 12.97 | 16.4 | 16.73 | KM Plot |
| THCA | rs7121554 | chr11:112048051 | C/T | 3.71E-5 | 486 | 15.97 | 16.27 | 12.37 | KM Plot |
| THCA | rs7122746 | chr11:133838808 | A/G | 0.000139 | 490 | 16.07 | 15.9 | 8.62 | KM Plot |
| THCA | rs7126014 | chr11:4167997 | G/A | 1.74E-7 | 490 | 19.05 | 13.9 | 16.38 | KM Plot |
| THCA | rs7126236 | chr11:129257694 | C/G | 0 | 490 | 15.65 | 17.7 | 5.8 | KM Plot |